Facility Publications

1. Shire, S., P. McKay, D. Leung, G. Cachianes, E. Jackson, W. Wood, K. Raghavendra, L. Khairallah and T. Schuster. 1990. Preparation and Properties of Recombinant DNA Derived TMV Coat Protein. Biochemistry 29: 5119- 5126.

2. Khandke, K.M., T. Fairwell, E. Braswell and B. Manjula. 1991. The Amino-Terminal Region of Group A Streptococcal M Protein Determines Its Molecular State of Assembly and Function. J. Protein Chemistry 10:49-59.

3. Oswald, R.E., M.J. Sutcliffe, M. Bamberger, R.H. Loring, E. Braswell and C.M. Dobson. 1991. Solution Structure of Neuronal Bungarotoxin Determined by Two-Dimensional NMR Spectroscopy: Sequence Specific Assignments, Secondary Structure, and Dimer Formation. Biochemistry 30:4901-4908.

4. Arakawa, T., D.A. Yphantis, J.W. Lary, L.O. Narhi, H. S. Lu, S. J.Prestrelski, C. L. Clogston, K.M. Zsebo, E.A. Mendiaz, J. Wypych and K.E. Langley. 1991. Glycosylated and Unglycosylated Recombinant-derived Human Stem Cell Factors Are Dimeric and Have Extensive Regular Secondary Structure. J. Biol. Chem. 266:18942-18948.

5. Narhi, L.O., W.C. Kenney, S.J. Prestrelski, T. Arakawa, D. Lyons, J.W. Lary and D.A. Yphantis. 1993. Conformation of Glutathione Adduct and Oxidized Forms of Platelet-Derived Growth Factor. Int. J. Peptide Protein Res. 41:8-14.

6. Narhi, L.O., R. Rosefeld, J. Talvenheimo, S.J. Prestrelski, T. Arakawa, J.W. Lary, C.G. Kolvenback, R. Hecht, T. Boone, J.A. Miller and D.A. Yphantis. 1993. Comparison of the Biophysical Characteristics of Human Brain-derived Neurotrophic Factor, Neurotrophin-3 and Nerve Growth Factor. J. Biol. Chem. 268:13309-13317.

7. Basu, M., J. Hakimi, L. Dharm, J. Kondas, W-H. Tsien, B. Pilson, P. Lin, A. Gilfillan, B. Haring, E. Braswell, M. Nettleton and J. Kochan. 1993. Purification and Characterization of Human Recombinant IgE-Fc Fragments which Bind to the Human High Affinity Receptor for IgE. J. Biol. Chem. 268:13118-13127.

8. Lundqvist, T., P.C. Weber, N. Hodge, E.H. Braswell, J. Rice and J. Pierce. 1993. Preliminary Crystallographic Studies on Scytalone Dehydratase from Magnaporthe grisea. J. Mol. Biol. 232:999-1002.

9.Dolinnaya, N.G., E.H. Braswell, J.A. Fossella, H. Klump and J. Fresco. 1993. Molecular and Thermodynamic Properties of d(A+-G)10, a Single Stranded Nucleic Acid Helix without Paired or Stacked Bases. Biochemistry 32:10263- 10270.

10. Long, C.G., E. Braswell, D. Zhu, J. Apigo, J. Baum and B. Brodsky. 1993. Characterization of Collagen Like Peptides Containing Interruptions in the Repeating Gly-X-Y Sequence. Biochemistry 32:11688-11695.

11. Kenney, W.C., M. Haniu, A.C. Herman, T. Arakawa, V.J. Costigan, J. Lary, D.A. Yphantis and A.R. Thomason. 1994. Formation of Mitogenically Active PDGF-B Dimer Does Not Require Interchain Disulfide Bonds. J. Biol. Chem. 269: 12351-12359.

12. Yphantis, D.A. and J. Lary. 1994. Modern Equilibrium Ultracentrifugation: Applications of Automated Interferometry. SPIE 2136:193-204.

13. Venugopal, M.G., J.A.M. Ramshaw, E. Braswell, D. Zhu and B. Brodsky. 1994. Electrostatic Interactions in Collagen-like Triple Helical Peptides. Biochemistry 33:7948-7956.

14. Lebowitz, J., S. Kar, E. Braswell, S. McPherson and D. Richard. 1994. Human Immunodeficiency Virus-1 Reverse Transcriptase Heterodimer Stability. Protein Science 3:1374-1382.

15. Schuster, T.M. and T.M. Laue, Eds., 1994. "Modern Analytical Ultracentrifugation". Birkhauser, Boston, MA.

16. Advant, S.J., E.H. Braswell, C.V. Kumar and D.S. Kalonia. 1995. The Effect of pH and Temperature on the Self-Association of Recombinant Human Interleukin-2 as Studied by Equilibrium Sedimentation. Pharmaceutical Research 12:637-641.

17. Weber, R.E., H. Malte, E.H. Braswell, R.W.A. Oliver, B.N. Green, P.K. Sharma, A. Kuchumov and S.N. Vinogradov. 1995. Mass Spectrometric Composition, Molecular Mass and Oxygen Binding of Macrobdella decora Hemoglobin and its Tetramer and Monomer Subunits. J. Mol. Biol. 251:703-720.

18. Hester, K., J. Luo, G. Burns, E. H. Braswell and J.R. Sokatch. 1995. Purification of active E1a2b2 of Pseudomonas putida branched- chain-oxoacid dehydrogenase. Eur. J. Biochem. 233:828-836.

19. Martin, P.D., A.R. Kuchumov, B.N. Green, R.W.A. Oliver, E.H. Braswell, J.S. Wall and S.N. Vinogradov. 1996. Mass Spectrometric Composition and Molecular Mass of Lumbricus terrestris Hemoglobin: A Refined Model of its Quaternary Structure. J. Mol. Biol. 255:154-169.

20. Lovett, E.G., D.A. d'Avignon, M.E. Holtzer, E.H. Braswell, D. Zhu and A. Holtzer. 1996. Observation via one-dimensional 13Ca NMR of local conformational substates in thermal unfolding equilibria of a synthetic analog of the GCN4 leucine zipper. Proc. Natl. Acad. Sci. USA. 93:1781-1785.

21. Krebs, A., A.R. Kuchumov, P.K. Sharma, E.H. Braswell, P. Zipper, R.E. Weber, G. Chottard and S.N. Vinogradov. 1996. Molecular Shape, Dissociation, and Oxygen Binding of the Dodecamer Subunit of Lumbricus terristris Hemoglobin. J. Biol. Chem. 271: 18695-18704.

22. Schuster, T.M. and J.M. Toedt. 1996. New revolutions in the evolution of analytical ultracentrifugation. Current Opinion in Structural Biol. 6:650-658

23. Schiber, MC., E H. Braswell, H. Klump and J.R. Fresco. 1996. Duplex-tetraplex equilibrium between a hairpin and two interacting hairpins of d(A-G)10 at neutral pH. Nucleic Acids Research 24: 5004-5012.

24. Madhsudan, K.T., N. Huang, E.H. Braswell and J.R. Sokatch. 1997. Binding of L-Branched-Chain Amino Acids Causes a Conformational Change in BkdR. J. Bacteriology 179: 276-279.

25. Royer, W.E., Jr., R.A. Fox, F.R. Smith, D. Zhu and E. H. Braswell. 1997. Ligand Linked Assembly of Scapharca Dimeric Hemoglobin. J. Biol. Chem. 272:5689-5694.

26. Paliwal, V, W. Ptak, J. Sperl, E. Braswell and P.W. Askenase. 1997. Recombinant Soluble ab T Cell Receptors Protect T Cells from Immune Suppression. J. Immunol 159: 1718-1727.

27. Zhang,Y., S. Rowland, G. King, E.H. Braswell and L. Rothfield. 1998. The Relation of Hetero-oligomer Formation to the Topological Specificity Domain of the E. coli MinE. J. Molecular Microbiology 30: 265-273.

28. Syoto, R., N. Murgolo, P. Mui, E. Huang. E. H. Braswell and W.T. Windsor. 1998. Structural and Biological Stability of the Human Interleukin 10 Hormdimer. Biochemistry 37: 16943-16951.

29. Toedt, J., E.H. Braswell, T.M. Schuster and D.A. Yphantis, Z.F. Tarporewala and J.N Culver. 1999. Biophysical Characterization of a designed TMV Coat Protein Mutant, R46G, that Elicits a Moderate Hypersensitivity Response in N. Sylvestris. Protein Science 8: 261-270.

30. Fezoui, Y., E.H. Braswell, W.Xian and J. Osterhout. 1999. Dissection of the De Novo Designed Peptide ata: Stability and Properties of the Intact Molecule and its Constituent Helices. Biochemistry 38:2796-2804.

31. Sengchanthalangsy, L., D. Datta, D.-B. Huang, E. Anderson, E.H. Braswell and G. Ghosh. 1999. Characterization of the Dimer Interface of Transcription Factor NF_kB p50 Homodimer. J. Mol. Biol. 289: 1029-1040.

32. Biswas, I., C. Ban, K.G. Fleming, J. Qin, J. W. Lary, D.A. Yphantis, W. Yang and P. Hseih. 1999. Oligomerization of a MutS Mismatch Repair Protein from Thermus aquaticus. J. Biol. Chem. 274: 23673-23678.

33. Georgescu. R.E., E.H. Braswell, D. Zhu and M.L. Tasayco. 1999. The Energetics of Assembling an Artificial Heterodimer with an alpha/beta Motif: Cleaved versus Uncleaved E. coli Thioredoxin. Biochemistry 38: 13355-13366.

34. Jones II, G., V. Vullev, E.H. Braswell and D. Zhu. 1999. Multi-step Photoinduced Electron Transfer in a de novo Helix Bundle: Multimer Self-assembly of Peptide Chains Including a Chromophore Special Pair. J. A. C. S. 122: 388-389.

35. Holtzer, M., E. Braswell, R. Angeletti, L. Mints, D. Zhu and A. Holtzer 2000. Ultracentrifuge and CD Studies of Folding Equilibria in a Retro GCN4-like Leucine Zippper Biophys.  J. 78: 2037-2048.

36. Doyle, S., E. Braswell and C. Teschke, 2000. SecA folds via a Dimeric Intermediate. Biochemistry 39:11667 -11676.

37. Schuck, P. and E. Braswell, 2000. Measuring Protein-Protein Interactions by Equilibrium Sedimentation. Current Protocols in Immunology (J.E. Coligan, A, Krusbeek, D.H. Margulies, E.M. Shevach, and W. Strober, eds.) pp.18.8.1-18.8.22 John Wiley and Sons, NY.

38. Shahied, L., E. Braswell, W. LeStourgeon and A. Krezel. 2001. An Antiparallel Four-helix Bundle Orients the High-affinity RNA Binding Sites in hnRNP C: A Mechinism for RNA Chaperonin Activity. J. Mol. Biol. 305:817-828.

39. Matsuura, J., A. Morris, R. Ketchem, E. Braswell, R. Klinke, W. Gombotz and R. Remmele, Jr. 2001. Biophysical Characterization of a Soluble CD40 Ligand (CD154) Coiled-Coil Trimer: Evidence of a Reversible Acid-Denatured Molten Globule. Arch. Biochem. Biophys. 392:208-218.

40. Snyder, S., Lary, J., Chen, Y., Gollnick, P. and J. L. Cole. 2004. Interaction of the trp RNA-binding Attenuation Protein (TRAP) with Anti-TRAP. J. Mol. Biol. 338, 669-682.

41. Ucci, J.W. and J. L. Cole. 2004. Global Analysis of Nonspecific Protein-Nucleic Interactions by Sedimentation Equilibrium. Biophys. Chem. 108, 127-140.

42. Cole, J. L. 2004. Analysis of Heterogeneous Interactions. Methods Enzymol. 384, 212-232.

43. Lemaire, P.A., Lary, J. and J.L. Cole. 2005. Mechanism of PKR activation: Dimerization and Kinase Activation in the Absence of Double-stranded RNA. J. Mol. Biol. 345, 81-90.